Development of 11 microsatellite markers for Giraffa camelopardalis through 454 pyrosequencing, with primer options for an additional 458 microsatellites

Author(s)Kerryn D. Carter, Jennifer M. Seddon, John K. Carter, Anne W. Goldizen and James P. Hereward
Year Published2012
JournalConservation Genetics Resources
Page Numbers943–945
Size77.63 KB
Abstract:

Many wild giraffe populations are declining across Africa, with two subspecies listed by the IUCN as Endangered in the past 4 years. We developed 11 microsatellite markers from Giraffa camelopardalis angolensis in Etosha National Park, Namibia using 454 sequencing. In 70 individuals, the loci showed 2–4 alleles per locus and expected heterozygosities of 0.082–0.711. There were no significant deviations from Hardy–Weinberg equilibrium for any of the loci. Null allele frequencies were low (<3 %) across all loci. We present primer options for an additional 458 microsatellites. This new set of microsatellite markers and primer options will benefit conservation, population and quantitative genetics studies of giraffe populations.

Keywords: Giraffa camelopardalis, Giraffes, Microsatellite markers, 454 pyrosequencing, Subspecies

Authors: Kerryn D. Carter, Jennifer M. Seddon, John K. Carter, Anne W. Goldizen and James P. Hereward

Journal: Conservation Genetics Resources


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